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Author SHA1 Message Date
Nathaniel Nicandro
1658cd0454 jupyter-kill-kernel (jupyter-server-kernel): Do nothing 
There is no need to forcibly kill a kernel since the notebook handles this
already.
 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
5bd164c224 Error when trying to read a notebook through a server 
We can't do much with a JSON representation of a notebook right now.
 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
9241296b45 jupyter-api-request: Ask for authorization on next request after an un-authorized one 
What is a better solution?
 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
194df39643 Separate tests that use a notebook server from the main tests 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
de320f83d2 jupyter-current-server: Also consider a remote default-directory 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
4a87d35f76 Jupyter notebook contents API integration with TRAMP 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
e8edd4d5cc Promote time encoding/decoding functions to public 
Also use `parse-iso8601-time-string` when decoding
 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
1d282c948a Support kernel servers via org-mode source blocks 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
67831c08fa Support Jupyter kernel servers 
* jupyter-client.el (jupyter-initialize-connection): Elevate NOTE to FIXME.
(jupyter-kernel-info): Extend timeout.

* jupyter-kernel-manager.el (jupyter-shutdown-kernel):
(jupyter-interrupt-kernel): Allow any number of arguments.

* jupyter-kernelspec.el (jupyter-find-kernelspecs): Optionally allow specs.

* jupyter-messages.el (jupyter-encode-raw-message): New function.

* jupyter-rest-api.el (jupyter-api-auth-headers): New function.

* jupyter-server-ioloop.el: New file.

* jupyter-server.el: New file.

* test/jupyter-test.el (jupyter-server):
(jupyter-server-kernel-manager):
(jupyter-server-start-new-kernel): New tests.
 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
9df340bd0f Add REST API 
* jupyter-rest-api.el: New file.

* test/jupyter-test.el (jupyter-rest-api):
(jupyter-api--copy-cookies, jupyter-api--password-login):
(jupyter-api-kernel-ws): New tests.

* test/test-helper.el (jupyter-test-rest-api): New macro.
 2019-07-24 16:59:04 -05:00
Nathaniel Nicandro
6650dd3588 Bump version 2019-07-24 16:03:22 -05:00
Nathaniel Nicandro
27f7c25bfa Update CHANGELOG 2019-07-24 16:03:22 -05:00
Nathaniel Nicandro
e0531d040c jupyter-repl-ret: Suppress all handlers except :is-complete-reply 
Fixes #153.
 2019-07-24 14:59:47 -05:00
Nathaniel Nicandro
1e10e161b7 jupyter-ioloop-timeout: Add documentation 2019-07-24 14:40:55 -05:00
Nathaniel Nicandro
1e6e83c12e Preserve outline visibility 
* jupyter-org-extensions.el (jupyter-org-closest-jupyter-language)
(jupyter-org-between-block-end-and-result-p):
(jupyter-org-next-busy-src-block):
(jupyter-org-move-src-block): Do it.
 2019-07-24 14:40:55 -05:00
Ruslan
7918293c41 Added warning to README.org about possible conflicts with ob-ipython (#135) 2019-07-24 12:50:41 -05:00
Nathaniel Nicandro
6b86fedb10 org-babel-jupyter-make-language-alias: Make sure variable is bound 2019-07-18 17:21:53 -05:00
Nathaniel Nicandro
cd127c5cb4 Silence byte compiler warning 2019-07-18 17:08:53 -05:00
Nathaniel Nicandro
f8796aa13f Partially revert "0f01a2a2ed36ffc676d1d5f39e2c3f562ad2ca03" 
The normal way of loading `ob-jupyter` is through `org-babel-do-load-languages`
so a users `exec-path` should be enabled by that time and so there is a higher
chance that it is setup correctly. See #151.
 2019-07-18 15:38:23 -05:00
Nathaniel Nicandro
857f5e5071 org-babel-jupyter-make-language-alias: Don't overwrite variables that already exist 
Also, set the :kernel header argument in the default header arguments for a
language if not already present.
 2019-07-18 15:35:15 -05:00
Nathaniel Nicandro
f906e62ed0 Simplify wording in README 2019-07-17 15:53:14 -05:00
Nathaniel Nicandro
cb1efa4268 jupyter-org--image-result: Fix a few issues 
* jupyter-org-client.el (jupyter-org--image-result):
Be more stringent on checking the value of `org-image-actual-width`. `listp`
returns t when passed nil, a valid value of `org-image-actual-width`.

Use absolute filenames when calling `create-image`.
 2019-07-14 17:56:33 -05:00
Nathaniel Nicandro
2992e24e57 jupyter-org--image-result: Fix byte-compile warning, update documentation 
* jupyter-org-client.el (jupyter-org-adjust-image-size): Cleanup documentation.
(jupyter-org--image-result): Do it.
 2019-07-14 17:20:41 -05:00
Nathaniel Nicandro
bf5589e428 Avoid use of jupyter-ioloop-wait-until 
* jupyter-channel-ioloop-comm.el (jupyter-stop-channel)
(jupyter-start-channel): Do it.

See https://github.com/dzop/emacs-jupyter/issues/148#issuecomment-511219046

In reality `jupyter-ioloop-wait-until` should be fixed to handle the case of
multiple events coming in before checking the waiting condition, but in this
case we can just check the liveness of the channels.
 2019-07-14 17:20:41 -05:00
Nathaniel Nicandro
abc029fd41 jupyter-get: Return nil on unbound variables, make setf-able 
* jupyter-client.el (jupyter-get): Do it.
 2019-07-14 17:20:41 -05:00
Nathaniel Nicandro
653f934bfc Add jupyter-org-(next|previous)-busy-src-block 
* jupyter-org-extensions.el (jupyter-org-next-busy-src-block)
(jupyter-org-previous-busy-src-block): Do it.
(jupyter-org-hydra/body): Add N and P bindings.
 2019-07-14 17:20:41 -05:00
Nathaniel Nicandro
1b1a55ef3f Add jupyter-org-request-at-point 
* jupyter-org-client.el (jupyter-org-request-at-point): Do it.
(org-babel-jupyter-src-block-session): New declare.

* ob-jupyter.el (org-babel-jupyter-session-clients): Add doc about keys.

* test/jupyter-test.el (jupyter-org-request-at-point): New test.
 2019-07-14 17:20:41 -05:00
Nathaniel Nicandro
259e8c5b86 Add jupyter-map-pending-requests 
* jupyter-client.el (jupyter-map-pending-requests): Do it.

* test/jupyter-test.el (jupyter-map-pending-requests): New test.
 2019-07-14 17:20:41 -05:00
Nathaniel Nicandro
1e9da5753d Add jupyter-org-interrupt-kernel 
* jupyter-org-extensions.el (jupyter-org-interrupt-kernel): Do it.
(jupyter-org-hydra/body): Add i binding.

* jupyter-repl.el (jupyter-repl-interrupt-kernel): Clarify error message.
 2019-07-14 17:20:18 -05:00
Nathaniel Nicandro
df6651a1f1 jupyter-org-result: More informative error 
* jupyter-org-client.el (jupyter-org-result): Do it.
 2019-07-14 17:03:38 -05:00
Yevgnen
c5c2c84a0d Add jupyter-org-adjust-image-size (#147) 2019-07-14 12:44:31 -05:00
Nathaniel Nicandro
7c1689e33d jupyter-org-client.el: Don't assume non-empty strings 2019-07-11 16:40:37 -05:00
Nathaniel Nicandro
e084842242 jupyter-org-insert-src-block: Don't move past an inlinetask 2019-07-10 19:24:06 -05:00
Nathaniel Nicandro
642b0ef592 jupyter-org-insert-src-block: Be aware of a src-block's results 
When `point` is between a src-block and its result with only whitespace
separating the end of a src-block and the beginning of its results, insert a
new src-block after the result.
 2019-07-10 17:28:58 -05:00
Nathaniel Nicandro
08a4723c0b jupyter-widgets-on-message: Fix wrong argument to jupyter-send 2019-07-10 12:02:13 -05:00
Nathaniel Nicandro
d5492c54fb jupyter-runtime-directory: Use an existing directory 
Set `default-directory` to one that should exist otherwise tests fail on
Appveyor.
 2019-07-09 13:50:27 -05:00
Nathaniel Nicandro
31b551bdc1 org-babel-jupyter--run-repl: Make language aliases for remote kernelspecs 2019-07-09 13:50:20 -05:00
Nathaniel Nicandro
0f01a2a2ed ob-jupyter.el: Don't make language aliases at load time 2019-07-09 13:47:17 -05:00
Nathaniel Nicandro
fb0317acdd Raise errors when jupyter-command returns nil 
* jupyter-env.el (jupyter-runtime-directory): Do it.

* jupyter-kernelspec.el (jupyter-available-kernelspecs): Do it.
 2019-07-09 13:47:17 -05:00
Nathaniel Nicandro
7b78ca7013 jupyter-runtime-directory: Don't call shell commands at load time 
* jupyter-env.el (jupyter-runtime-directory): Remove custom status.
New function definition.

* jupyter-kernel-manager.el (jupyter-write-connection-file):
Use new function.

* ob-jupyter.el (org-babel-jupyter--run-repl):
Remove setting of `jupyter-runtime-directory`.

* test/jupyter-test.el (jupyter-runtime-directory): New test.
 2019-07-08 20:23:23 -05:00
Nathaniel Nicandro
4f944d311c jupyter-send (jupyter-ioloop): Fix placement of setq 2019-07-08 17:27:29 -05:00
Nathaniel Nicandro
4daa09bb15 jupyter-send (jupyter-ioloop): Don't create a temporary buffer on every send 2019-07-08 16:56:36 -05:00
Nathaniel Nicandro
02a0b470d9 jupyter-ioloop: Fix for subprocess stdin buffering issue 2019-07-08 16:56:28 -05:00
Nathaniel Nicandro
909cdf3dd7 jupyter-org-insert-src-block: Add blank lines where appropriate 2019-07-01 11:49:17 -05:00
Nathaniel Nicandro
23a692d0b4 jupyter-completion-prefix (julia): Don't keep : prefix on non-symbol looking prefixes 2019-07-01 11:49:17 -05:00
Nathaniel Nicandro
6f0686e186 jupyter-kernel-info: Increase timeout again 
Needed much more often for the IJulia kernel when starting it via the notebook
support landing soon.
 2019-07-01 11:46:57 -05:00
Nathaniel Nicandro
f5d852dc6d Fix macro hygiene issues 2019-06-30 12:36:41 -05:00
Nathaniel Nicandro
4c3168d53f Add jupyter-server-mode-set-client 
This is an attempt at associating a REPL client with a buffer which was created
by emacsclient.
 2019-06-30 12:36:41 -05:00
Nathaniel Nicandro
8f9ec15af0 Add jupyter-org-table-string 2019-06-30 12:22:26 -05:00
Nathaniel Nicandro
aedd0d41d6 Update README 2019-06-30 12:22:26 -05:00