Merge pull request #786 from trepetti/exceptiongroup-flit_scm

overrides: build systems and fixes

overrides/build-systems.json

@@ -2778,6 +2778,9 @@
   "cmdline": [
     "setuptools"
   ],
+  "cmdstanpy": [
+    "setuptools"
+  ],
   "cmigemo": [
     "setuptools"
   ],
@@ -4566,6 +4569,7 @@
   ],
   "exceptiongroup": [
     "flit-core",
+    "flit-scm",
     "flitBuildHook",
     "setuptools"
   ],
@@ -7255,7 +7259,14 @@
     "setuptools"
   ],
   "jupyter-server": [
-    "setuptools"
+    {
+      "buildSystem": "setuptools",
+      "until": "1.21.0"
+    },
+    {
+      "buildSystem": "jupyter-packaging",
+      "from": "1.21.0"
+    }
   ],
   "jupyter-server-mathjax": [
     "jupyter-packaging",
@@ -7904,6 +7915,9 @@
   "luhn": [
     "setuptools"
   ],
+  "lunarcalendar": [
+    "setuptools"
+  ],
   "lupa": [
     "cython",
     "setuptools"
@@ -9119,7 +9133,14 @@
   ],
   "notebook-shim": [
     "jupyter-packaging",
-    "setuptools"
+    {
+      "buildSystem": "setuptools",
+      "until": "0.2.0"
+    },
+    {
+      "buildSystem": "hatchling",
+      "from": "0.2.0"
+    }
   ],
   "notedown": [
     "setuptools"
@@ -10304,6 +10325,9 @@
   "plyvel": [
     "setuptools"
   ],
+  "pmdarima": [
+    "setuptools"
+  ],
   "pmsensor": [
     "setuptools"
   ],
@@ -14979,6 +15003,9 @@
   "shamir-mnemonic": [
     "setuptools"
   ],
+  "shap": [
+    "setuptools"
+  ],
   "shapely": [
     "cython",
     "setuptools"
@@ -15743,6 +15770,9 @@
   "statsd": [
     "setuptools"
   ],
+  "statsforecast": [
+    "setuptools"
+  ],
   "statsmodels": [
     "cython",
     "setuptools"
@@ -16040,6 +16070,9 @@
   "taxi": [
     "setuptools"
   ],
+  "tbats": [
+    "setuptools"
+  ],
   "tblib": [
     "setuptools"
   ],

overrides/default.nix

@@ -309,6 +309,18 @@ lib.composeManyExtensions [
           )
         );
 
+      cmdstanpy = super.cmdstanpy.overridePythonAttrs (
+        old: {
+          propagatedBuildInputs = (old.propagatedBuildInputs or [ ]) ++ [ pkgs.cmdstan ];
+          patchPhase = ''
+            substituteInPlace cmdstanpy/model.py \
+              --replace 'cmd = [make]' \
+              'cmd = ["${pkgs.cmdstan}/bin/stan"]'
+          '';
+          CMDSTAN = "${pkgs.cmdstan}";
+        }
+      );
+
       contourpy = super.contourpy.overridePythonAttrs (
         old: {
           buildInputs = (old.buildInputs or [ ]) ++ [ self.pybind11 ];
@@ -420,6 +432,10 @@ lib.composeManyExtensions [
         '';
       });
 
+      darts = super.darts.override {
+        preferWheel = true;
+      };
+
       datadog-lambda = super.datadog-lambda.overridePythonAttrs (old: {
         postPatch = ''
           substituteInPlace setup.py --replace "setuptools==" "setuptools>="
@@ -1508,6 +1524,12 @@ lib.composeManyExtensions [
         propagatedBuildInputs = (old.propagatedBuildInputs or [ ]) ++ [ self.setuptools ];
       });
 
+      prophet = super.prophet.overridePythonAttrs (old: {
+        propagatedBuildInputs = (old.propagatedBuildInputs or [ ]) ++ [ pkgs.cmdstan self.cmdstanpy ];
+        PROPHET_REPACKAGE_CMDSTAN = "false";
+        CMDSTAN = "${pkgs.cmdstan}";
+      });
+
       psycopg2 = super.psycopg2.overridePythonAttrs (
         old: {
           buildInputs = (old.buildInputs or [ ])
@@ -1782,6 +1804,16 @@ lib.composeManyExtensions [
         }
       );
 
+      pytorch-lightning = super.pytorch-lightning.override {
+        unpackPhase = ''
+          # $src remains a gzipped tarball otherwise.
+          mkdir -p tmp
+          tar xvf $src --directory=tmp
+          mv tmp/pytorch-lightning*/* .
+          rm -rf tmp
+        '';
+      };
+
       pyqt5 =
         let
           qt5 = selectQt5 super.pyqt5.version;