updating the caclulations in 4

python/energy_flow_proper/04_gaussian_nonzero/comparison_with_hops.org

@@ -122,8 +122,9 @@ This will be tangled into the [[file:config.py][config file]] that can be used w
 #+end_src
 
 #+RESULTS:
-: 100% 9999/9999 [00:39<00:00, 255.45it/s]
-: INFO:root:Writing cache to: results/system_energy_sandwhich_operator_10000_None_b732ef84d0489649e904cf6b7cf525761a9a9cd4fc61fcc9613a870ac4e0c09c.npy
+: 100% 9999/9999 [00:30<00:00, 328.73it/s]
+: INFO:root:Writing cache to: results/system_energy_sandwhich_operator_10000_None_62b0326f945223264ba0ba55c8c23c35b283fbdee22d7d32dd74f33a31d3f945.npy
+
 
 #+begin_src jupyter-python
   with ut.hiro_style():
@@ -131,7 +132,7 @@ This will be tangled into the [[file:config.py][config file]] that can be used w
 #+end_src
 
 #+RESULTS:
-[[file:./.ob-jupyter/dbdd5fb75968cd91fba721995f017ded50c22f1e.svg]]
+[[file:./.ob-jupyter/8c237b191bc4cb71bb4e6064fa30b435212d12d8.svg]]
 
 
 * Heat Flow
@@ -157,8 +158,7 @@ This will be tangled into the [[file:config.py][config file]] that can be used w
 #+end_src
 
 #+RESULTS:
-: 100% 9999/9999 [04:47<00:00, 34.78it/s]
-: INFO:root:Writing cache to: results/heat_flow__heat_flow_ensemble_body_10000_2000_5f1d1857f6e88f049e7a6ad13310daf235b5b888ef49a541774d1c706725f1bb.npy
+: INFO:root:Loading cache from: results/heat_flow__heat_flow_ensemble_body_10000_2000_17704c7c12d2f6da87a4cf307a313874fcdb816894dacf7686154e392bd12a46.npy
 
 #+begin_src jupyter-python
   with ut.hiro_style():
@@ -167,7 +167,7 @@ This will be tangled into the [[file:config.py][config file]] that can be used w
 #+end_src
 
 #+RESULTS:
-[[file:./.ob-jupyter/e2f695d0cc2910195a294d7568573bab0f86c4c1.svg]]
+[[file:./.ob-jupyter/334f6d05105c3299c22f4c13219ed46fc412f27b.svg]]
 
 
 
@@ -215,7 +215,7 @@ LGTM.
 #+end_src
 
 #+RESULTS:
-[[file:./.ob-jupyter/f563c501f649e3348b98dc577197f116d04392b1.svg]]
+[[file:./.ob-jupyter/dd9362c7168a81eab56250a544bfba60c5e85be0.svg]]
 
 #+begin_src jupyter-python :results none
   sys = gf.SystemParams(Ω=1, η=system.bcf_scale, α_0=α_0)
@@ -230,7 +230,7 @@ LGTM.
 #+end_src
 
 #+RESULTS:
-[[file:./.ob-jupyter/df18982e8eac932a9563e670ee145a83b22606e7.svg]]
+[[file:./.ob-jupyter/4301be4de3bbd9ea0e29082ad61b5b0e43cd4062.svg]]
 
 * Compare
 #+begin_src jupyter-python
@@ -241,7 +241,7 @@ LGTM.
 #+end_src
 
 #+RESULTS:
-[[file:./.ob-jupyter/0036e379b0dba46540ff1c0cb0961ab57b339642.svg]]
+[[file:./.ob-jupyter/7a48cff40815e6db860a76e8736758627de77209.svg]]
 
 #+begin_src jupyter-python
   with ut.hiro_style():
@@ -250,7 +250,7 @@ LGTM.
 #+end_src
 
 #+RESULTS:
-[[file:./.ob-jupyter/9f96530c7c59f74a7052dca1f859fa6d2cf01caa.svg]]
+[[file:./.ob-jupyter/736fb7d2cbf5d3a55543edb33de8f7c0e243638c.svg]]
 
 * Cleanup
 #+begin_src jupyter-python :results none

python/energy_flow_proper/04_gaussian_nonzero/flake.lock

@@ -32,11 +32,11 @@
     },
     "nixpkgs": {
       "locked": {
-        "lastModified": 1638986258,
-        "narHash": "sha256-OceRdctKZRSgqQxVRvvNB0MaEnFMzQqjUffecoDE9eI=",
+        "lastModified": 1642281915,
+        "narHash": "sha256-jcMsXmmO1knyf99o242A+2cy1A0eKa9afly0cwBknPA=",
         "owner": "NixOS",
         "repo": "nixpkgs",
-        "rev": "581d2d6c9cd5c289002203581d8aa0861963a933",
+        "rev": "d5dae6569ea9952f1ae4e727946d93a71c507821",
         "type": "github"
       },
       "original": {

python/energy_flow_proper/04_gaussian_nonzero/flake.nix

@@ -12,7 +12,7 @@
       shellPackages = pkgs: with pkgs; [ pyright python3Packages.jupyter ];
       shellOverride = (oldAttrs: {
         shellHook = ''
-                    #export PYTHONPATH=/home/hiro/src/hopsflow/$PYTHONPATH
+                    #export PYTHONPATH=/home/hiro/src/hopsflow/:$PYTHONPATH
                     '';
       });
       noPackage = true;

python/energy_flow_proper/04_gaussian_nonzero/poetry.lock

@@ -315,7 +315,7 @@ resolved_reference = "227dc0e039bd4503897ba323c3826dc69c99365e"
 
 [[package]]
 name = "hopsflow"
-version = "1.0.3"
+version = "1.0.5"
 description = "Calculating open system bath energy changes with HOPS and analytically."
 category = "main"
 optional = false
@@ -334,7 +334,7 @@ tqdm = "^4.62.3"
 type = "git"
 url = "https://github.com/vale981/hopsflow"
 reference = "main"
-resolved_reference = "1b0fda764a89feb3eb58afe6e81248acb5031396"
+resolved_reference = "9ab581f8946981f62d3f95c572755e1317ea3e6e"
 
 [[package]]
 name = "ipykernel"
@@ -1136,7 +1136,7 @@ scipy = "^1.7.3"
 type = "git"
 url = "https://github.com/vale981/stocproc"
 reference = "master"
-resolved_reference = "1c17d534c323f9222c3b1ba17f275e6c1ae1e2d8"
+resolved_reference = "43ba8282d8476840b5c8077ee177835656601c23"
 
 [[package]]
 name = "terminado"