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+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/.ob-jupyter/ed60941fac1fe754ef3b56d5f56b7b83a3d91291.svg
@@ -0,0 +1,63943 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/project.org b/python/otto_motor/subprojects/cycle_length_coupling_strength/project.org
index 8782688..c54d2db 100644
--- a/python/otto_motor/subprojects/cycle_length_coupling_strength/project.org
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/project.org
@@ -303,96 +303,26 @@ coupling-change/cycle time.
#+RESULTS:
#+begin_src jupyter-python :results none :tangle tangle/weak_coupling_model.py
- weak_coupling_model = make_model(50, .01)
- weak_coupling_model.num_cycles = 15
- weak_coupling_model.k_max = 2
+ weak_coupling_model = make_model(50, .2)
+ weak_coupling_model.num_cycles = 5
#+end_src
** Integrate
#+begin_src jupyter-python :tangle tangle/weak_coupling_model.py
- ot.integrate_online(weak_coupling_model, 100, analyze_kwargs=dict(every=10_000))
+ ot.integrate_online(weak_coupling_model, 50_000, analyze_kwargs=dict(every=10_000))
#+end_src
#+RESULTS:
-:RESULTS:
-#+begin_example
- [INFO hops.core.integration 290962] Choosing the nonlinear integrator.
- [INFO root 290962] Starting analysis process.
- [INFO root 290962] Started analysis process with pid 293338.
- [INFO hops.core.hierarchy_data 290962] Creating the streaming fifo at: /home/hiro/Documents/Projects/UNI/master/eflow_paper/python/otto_motor/subprojects/cycle_length_coupling_strength/results_ef8e3679c35345f6c603306d9c116e7f72af929efd9037b1f3858e1f3d306a87.fifo
- [INFO hops.core.integration 290962] Using 16 integrators.
- [INFO hops.core.integration 290962] Some 100 trajectories have to be integrated.
- [INFO hops.core.integration 290962] Using 66 hierarchy states.
- 0% 0/100 [00:00, ?it/s][INFO hops.core.signal_delay 290962] caught sig 'SIGINT'
-
- 0% 0/100 [00:10, ?it/s]
- 2023-07-10 14:21:28,916 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:28,917 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:28,919 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:28,920 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- [INFO hops.core.signal_delay 290962] caught 1 signal(s)
- 2023-07-10 14:21:28,921 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- [INFO hops.core.signal_delay 290962] emit signal 'SIGINT'
- [INFO hops.core.signal_delay 290962] caught sig 'SIGINT'
- 2023-07-10 14:21:28,924 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:28,927 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:28,928 WARNING worker.py:1404 -- A worker died or was killed while executing a task by an unexpected system error. To troubleshoot the problem, check the logs for the dead worker. RayTask ID: 42eb0de981b10f9ded44f707c2238576ac033f1501000000 Worker ID: ab3bee80797ba4d55a20a02edba9fc252c2f48eed15636ec6543f53b Node ID: 6f18af98e8f1029efc0c6aab222a211f324ccc8890393f00385bece8 Worker IP address: 10.121.151.166 Worker port: 37335 Worker PID: 291261
- 2023-07-10 14:21:28,961 WARNING worker.py:1404 -- A worker died or was killed while executing a task by an unexpected system error. To troubleshoot the problem, check the logs for the dead worker. RayTask ID: c73273ba2de9e743dd3864a96c16b15a37f8a0bb01000000 Worker ID: 47c18d4d67e434163287de7d8bd0dad4d633903880d6e64886a1b419 Node ID: 6f18af98e8f1029efc0c6aab222a211f324ccc8890393f00385bece8 Worker IP address: 10.121.151.166 Worker port: 46419 Worker PID: 291262
- 2023-07-10 14:21:28,962 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,022 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,045 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,058 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,091 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,129 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,160 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,206 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- 2023-07-10 14:21:29,247 ERROR worker.py:94 -- Unhandled error (suppress with 'RAY_IGNORE_UNHANDLED_ERRORS=1'): The worker died unexpectedly while executing this task. Check python-core-worker-*.log files for more information.
- [INFO hops.core.signal_delay 290962] caught 1 signal(s)
- [INFO hops.core.signal_delay 290962] emit signal 'SIGINT'
-#+end_example
-# [goto error]
-#+begin_example
- [0;31m---------------------------------------------------------------------------[0m
- [0;31mKeyboardInterrupt[0m Traceback (most recent call last)
- Cell [0;32mIn[86], line 1[0m
- [0;32m----> 1[0m [43mot[49m[38;5;241;43m.[39;49m[43mintegrate_online[49m[43m([49m[43mweak_coupling_model[49m[43m,[49m[43m [49m[38;5;241;43m100[39;49m[43m,[49m[43m [49m[43manalyze_kwargs[49m[38;5;241;43m=[39;49m[38;5;28;43mdict[39;49m[43m([49m[43mevery[49m[38;5;241;43m=[39;49m[38;5;241;43m10_000[39;49m[43m)[49m[43m)[49m
-
- File [0;32m~/Documents/Projects/UNI/master/eflow_paper/python/otto_motor/subprojects/cycle_length_coupling_strength/otto_utilities.py:363[0m, in [0;36mintegrate_online[0;34m(model, n, stream_folder, **kwargs)[0m
- [1;32m 362[0m [38;5;28;01mdef[39;00m [38;5;21mintegrate_online[39m(model, n, stream_folder[38;5;241m=[39m[38;5;28;01mNone[39;00m, [38;5;241m*[39m[38;5;241m*[39mkwargs):
- [0;32m--> 363[0m [43maux[49m[38;5;241;43m.[39;49m[43mintegrate[49m[43m([49m
- [1;32m 364[0m [43m [49m[43mmodel[49m[43m,[49m
- [1;32m 365[0m [43m [49m[43mn[49m[43m,[49m
- [1;32m 366[0m [43m [49m[43mstream_file[49m[38;5;241;43m=[39;49m[43m([49m[38;5;124;43m"[39;49m[38;5;124;43m"[39;49m[43m [49m[38;5;28;43;01mif[39;49;00m[43m [49m[43mstream_folder[49m[43m [49m[38;5;129;43;01mis[39;49;00m[43m [49m[38;5;28;43;01mNone[39;49;00m[43m [49m[38;5;28;43;01melse[39;49;00m[43m [49m[43mstream_folder[49m[43m)[49m
- [1;32m 367[0m [43m [49m[38;5;241;43m+[39;49m[43m [49m[38;5;124;43mf[39;49m[38;5;124;43m"[39;49m[38;5;124;43mresults_[39;49m[38;5;132;43;01m{[39;49;00m[43mmodel[49m[38;5;241;43m.[39;49m[43mhexhash[49m[38;5;132;43;01m}[39;49;00m[38;5;124;43m.fifo[39;49m[38;5;124;43m"[39;49m[43m,[49m
- [1;32m 368[0m [43m [49m[43manalyze[49m[38;5;241;43m=[39;49m[38;5;28;43;01mTrue[39;49;00m[43m,[49m
- [1;32m 369[0m [43m [49m[38;5;241;43m*[39;49m[38;5;241;43m*[39;49m[43mkwargs[49m[43m,[49m
- [1;32m 370[0m [43m [49m[43m)[49m
-
- File [0;32m~/src/two_qubit_model/hiro_models/model_auxiliary.py:201[0m, in [0;36mintegrate[0;34m(model, n, data_path, clear_pd, single_process, stream_file, analyze, results_path, analyze_kwargs)[0m
- [1;32m 199[0m supervisor[38;5;241m.[39mintegrate_single_process(clear_pd)
- [1;32m 200[0m [38;5;28;01melse[39;00m:
- [0;32m--> 201[0m supervisor[38;5;241m.[39mintegrate(clear_pd)
- [1;32m 203[0m cleanup([38;5;241m0[39m)
-
- File [0;32m/nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/signal_delay.py:87[0m, in [0;36msig_delay.__exit__[0;34m(self, exc_type, exc_val, exc_tb)[0m
- [1;32m 84[0m [38;5;28;01mif[39;00m [38;5;28mlen[39m([38;5;28mself[39m[38;5;241m.[39msigh[38;5;241m.[39msigs_caught) [38;5;241m>[39m [38;5;241m0[39m [38;5;129;01mand[39;00m [38;5;28mself[39m[38;5;241m.[39mhandler [38;5;129;01mis[39;00m [38;5;129;01mnot[39;00m [38;5;28;01mNone[39;00m:
- [1;32m 85[0m [38;5;28mself[39m[38;5;241m.[39mhandler([38;5;28mself[39m[38;5;241m.[39msigh[38;5;241m.[39msigs_caught)
- [0;32m---> 87[0m [38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43m_restore[49m[43m([49m[43m)[49m
-
- File [0;32m/nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/signal_delay.py:68[0m, in [0;36msig_delay._restore[0;34m(self)[0m
- [1;32m 66[0m [38;5;28;01mfor[39;00m i, s [38;5;129;01min[39;00m [38;5;28menumerate[39m([38;5;28mself[39m[38;5;241m.[39msigs):
- [1;32m 67[0m signal[38;5;241m.[39msignal(s, [38;5;28mself[39m[38;5;241m.[39mold_handlers[i])
- [0;32m---> 68[0m [38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43msigh[49m[38;5;241;43m.[39;49m[43memit[49m[43m([49m[43m)[49m
-
- File [0;32m/nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/signal_delay.py:42[0m, in [0;36mSigHandler.emit[0;34m(self)[0m
- [1;32m 40[0m [38;5;28;01mfor[39;00m s [38;5;129;01min[39;00m [38;5;28mself[39m[38;5;241m.[39msigs_caught:
- [1;32m 41[0m log[38;5;241m.[39minfo([38;5;124m"[39m[38;5;124memit signal [39m[38;5;124m'[39m[38;5;132;01m{}[39;00m[38;5;124m'[39m[38;5;124m"[39m[38;5;241m.[39mformat(SIG_MAP[s]))
- [0;32m---> 42[0m [43mos[49m[38;5;241;43m.[39;49m[43mkill[49m[43m([49m[43mos[49m[38;5;241;43m.[39;49m[43mgetpid[49m[43m([49m[43m)[49m[43m,[49m[43m [49m[43ms[49m[43m)[49m
-
- [0;31mKeyboardInterrupt[0m:
-#+end_example
-:END:
+: [INFO hops.core.integration 290962] Choosing the nonlinear integrator.
+: [INFO root 290962] Starting analysis process.
+: [INFO root 290962] Started analysis process with pid 304855.
+: [INFO hops.core.hierarchy_data 290962] Creating the streaming fifo at: /home/hiro/Documents/Projects/UNI/master/eflow_paper/python/otto_motor/subprojects/cycle_length_coupling_strength/results_f9d1bda1cf5d0f7419d0cc1b1b5db082c13604538255d3dfbc05af9f0d354f49.fifo
+: [INFO hops.core.integration 290962] Using 16 integrators.
+: [INFO hops.core.integration 290962] Some 16 trajectories have to be integrated.
+: [INFO hops.core.integration 290962] Using 1001 hierarchy states.
+: 100% 16/16 [01:28<00:00, 5.52s/it]
+:
** Analysis
#+begin_src jupyter-python
@@ -402,28 +332,36 @@ coupling-change/cycle time.
#+RESULTS:
:RESULTS:
-| array | ((-0.03997036 -0.03997036 -0.03996733 ... -0.21910526 -0.21910526 -0.21910526)) |
-[[file:./.ob-jupyter/c1241b127ae3595367627adfdc9a1f6114cbc6af.svg]]
+| array | ((-0.18507824 -0.18507818 -0.18506804 ... -0.87570649 -0.87570633 -0.87570633)) |
+[[file:./.ob-jupyter/ed60941fac1fe754ef3b56d5f56b7b83a3d91291.svg]]
:END:
+
+
#+begin_src jupyter-python
- weak_coupling_model.total_power().value[weak_coupling_model.strobe[1][7]:-1].mean()
#weak_coupling_model.strobe[1]
#+end_src
#+RESULTS:
-: 0.0
+:RESULTS:
+# [goto error]
+: [0;31m---------------------------------------------------------------------------[0m
+: [0;31mIndexError[0m Traceback (most recent call last)
+: Cell [0;32mIn[92], line 1[0m
+: [0;32m----> 1[0m weak_coupling_model[38;5;241m.[39mtotal_power()[38;5;241m.[39mvalue[[43mweak_coupling_model[49m[38;5;241;43m.[39;49m[43mstrobe[49m[43m[[49m[38;5;241;43m1[39;49m[43m][49m[43m[[49m[38;5;241;43m7[39;49m[43m][49m:[38;5;241m-[39m[38;5;241m1[39m][38;5;241m.[39mmean()
+: [1;32m 3[0m [38;5;66;03m#weak_coupling_model.strobe[1][39;00m
+:
+: [0;31mIndexError[0m: index 7 is out of bounds for axis 0 with size 6
+:END:
#+begin_src jupyter-python
-weak_coupling_model.efficiency(steady_idx=7)
-weak_coupling_model.steady_bath_energy_change(steady_idx=7, bath=1)
-weak_coupling_model.steady_total_energy_change(steady_idx=7)
+weak_coupling_model.efficiency(steady_idx=-3)
#+end_src
#+RESULTS:
-: EnsembleValue([(100, 8.326672684688674e-17, 0.010617712466080408)])
+: EnsembleValue([(16, 0.3649132926357113, 0.21802876349189884)])
* Things to Look At
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/coupling_strength.py b/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/coupling_strength.py
index f3c5332..8e54684 100644
--- a/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/coupling_strength.py
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/coupling_strength.py
@@ -202,10 +202,6 @@ fs.export_fig("coupling_speed_scan_power_efficiency_uncertainty")
ot.plot_energy(weak_coupling_model)
weak_coupling_model.total_energy_from_power().slice(slice(weak_coupling_model.strobe[1][1], None, 1)).values
-weak_coupling_model.total_power().value[weak_coupling_model.strobe[1][7]:-1].mean()
-
#weak_coupling_model.strobe[1]
-weak_coupling_model.efficiency(steady_idx=7)
-weak_coupling_model.steady_bath_energy_change(steady_idx=7, bath=1)
-weak_coupling_model.steady_total_energy_change(steady_idx=7)
+weak_coupling_model.efficiency(steady_idx=-3)
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/weak_coupling_model.py b/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/weak_coupling_model.py
index 864caa6..d981754 100644
--- a/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/weak_coupling_model.py
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/tangle/weak_coupling_model.py
@@ -44,8 +44,7 @@ def make_model(Θ, δ):
L_shift=(0, 0),
)
-weak_coupling_model = make_model(50, .01)
-weak_coupling_model.num_cycles = 15
-weak_coupling_model.k_max = 2
+weak_coupling_model = make_model(50, .2)
+weak_coupling_model.num_cycles = 5
-ot.integrate_online(weak_coupling_model, 100, analyze_kwargs=dict(every=10_000))
+ot.integrate_online(weak_coupling_model, 50_000, analyze_kwargs=dict(every=10_000))
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/045efebdb7009899f180780898a31b7f6c48e106.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/045efebdb7009899f180780898a31b7f6c48e106.svg
new file mode 100644
index 0000000..2bb4e59
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/045efebdb7009899f180780898a31b7f6c48e106.svg
@@ -0,0 +1,122401 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/0ce1c995679c905cf03f5f22b77d170c6bb36256.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/0ce1c995679c905cf03f5f22b77d170c6bb36256.svg
new file mode 100644
index 0000000..c78bb5b
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/0ce1c995679c905cf03f5f22b77d170c6bb36256.svg
@@ -0,0 +1,1381 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/112a8c6e447f4211f90e5db647df83a97bdfb292.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/112a8c6e447f4211f90e5db647df83a97bdfb292.svg
new file mode 100644
index 0000000..708926a
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/112a8c6e447f4211f90e5db647df83a97bdfb292.svg
@@ -0,0 +1,92987 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/2a877ebd7c84b122825c60319a419fe5cd199876.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/2a877ebd7c84b122825c60319a419fe5cd199876.svg
new file mode 100644
index 0000000..06c2de6
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/2a877ebd7c84b122825c60319a419fe5cd199876.svg
@@ -0,0 +1,92189 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/31011c08fcf8cb9aab5b6fb5e9479c830b5523ce.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/31011c08fcf8cb9aab5b6fb5e9479c830b5523ce.svg
new file mode 100644
index 0000000..1272dfa
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/31011c08fcf8cb9aab5b6fb5e9479c830b5523ce.svg
@@ -0,0 +1,157164 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/3d747faae890aff5b004df68059ffb918e14d0ae.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/3d747faae890aff5b004df68059ffb918e14d0ae.svg
new file mode 100644
index 0000000..086245a
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/3d747faae890aff5b004df68059ffb918e14d0ae.svg
@@ -0,0 +1,1363 @@
+
+
+
diff --git a/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/4b60282e07356bc7faa706d37adf0469093142fe.svg b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/4b60282e07356bc7faa706d37adf0469093142fe.svg
new file mode 100644
index 0000000..644bab4
--- /dev/null
+++ b/python/otto_motor/subprojects/cycle_length_coupling_strength/taurus/.ob-jupyter/4b60282e07356bc7faa706d37adf0469093142fe.svg
@@ -0,0 +1,1385 @@
+
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