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update bath memory graphics
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Before Width: | Height: | Size: 19 KiB |
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|
@ -116,100 +116,64 @@ coupling-change/cycle time.
|
|||
fig, ax = plt.subplots()
|
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for model in models:
|
||||
pu.plot_with_σ(models[0].t, model.interaction_power().sum_baths().integrate(model.t), ax=ax)
|
||||
print(model.power(steady_idx=2).value, model.T[0], model.ω_c[0])
|
||||
print(model.system_energy().N, model.power(steady_idx=2).value, model.T[0], model.ω_c[0])
|
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#+end_src
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#+RESULTS:
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:RESULTS:
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: -0.0035256859094574657 0.4 0.5
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: -0.003003232549170266 0.45 0.5
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: -0.002486223631053281 0.5 0.5
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: -0.002031171680593496 0.55 0.5
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: -0.0015762813191599482 0.6 0.5
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: -0.0043251633398041734 0.45 0.75
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: -0.0038327711397568402 0.5 0.75
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: -0.0034164331023658415 0.55 0.75
|
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# [goto error]
|
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#+begin_example
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[0;31m---------------------------------------------------------------------------[0m
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[0;31mRuntimeError[0m Traceback (most recent call last)
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Cell [0;32mIn[20], line 3[0m
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[1;32m 1[0m fig, ax [38;5;241m=[39m plt[38;5;241m.[39msubplots()
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[1;32m 2[0m [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models:
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[0;32m----> 3[0m pu[38;5;241m.[39mplot_with_σ(models[[38;5;241m0[39m][38;5;241m.[39mt, [43mmodel[49m[38;5;241;43m.[39;49m[43minteraction_power[49m[43m([49m[43m)[49m[38;5;241m.[39msum_baths()[38;5;241m.[39mintegrate(model[38;5;241m.[39mt), ax[38;5;241m=[39max)
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[1;32m 4[0m [38;5;28mprint[39m(model[38;5;241m.[39mpower(steady_idx[38;5;241m=[39m[38;5;241m2[39m)[38;5;241m.[39mvalue, model[38;5;241m.[39mT[[38;5;241m0[39m], model[38;5;241m.[39mω_c[[38;5;241m0[39m])
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File [0;32m~/src/two_qubit_model/hiro_models/model_base.py:560[0m, in [0;36mModel.interaction_power[0;34m(self, data, results_path, **kwargs)[0m
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||||
[1;32m 550[0m [38;5;124;03m"""Calculates interaction power from the hierarchy data[39;00m
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[1;32m 551[0m [38;5;124;03m``data`` or, if not supplied, tries to load the online results from ``results_path``.[39;00m
|
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[1;32m 552[0m
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[0;32m (...)[0m
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[1;32m 556[0m [38;5;124;03m:returns: See :any:`hopsflow.util.interaction_energy_ensemble`.[39;00m
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[1;32m 557[0m [38;5;124;03m"""[39;00m
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[1;32m 559[0m [38;5;28;01mif[39;00m data [38;5;129;01mis[39;00m [38;5;28;01mNone[39;00m:
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[0;32m--> 560[0m [38;5;28;01mreturn[39;00m [38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43mtry_get_online_data[49m[43m([49m
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[1;32m 561[0m [43m [49m[43mresults_path[49m[43m,[49m[43m [49m[38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43monline_interaction_power_name[49m
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[1;32m 562[0m [43m [49m[43m)[49m
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[1;32m 564[0m N, kwargs [38;5;241m=[39m _get_N_kwargs(kwargs, data)
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[1;32m 566[0m [38;5;28;01mreturn[39;00m hopsflow[38;5;241m.[39mhopsflow[38;5;241m.[39minteraction_energy_ensemble(
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[1;32m 567[0m data[38;5;241m.[39mvalid_sample_iterator(data[38;5;241m.[39mstoc_traj), [38;5;66;03m# type: ignore[39;00m
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[1;32m 568[0m data[38;5;241m.[39mvalid_sample_iterator(data[38;5;241m.[39maux_states), [38;5;66;03m# type: ignore[39;00m
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[0;32m (...)[0m
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[1;32m 574[0m [38;5;241m*[39m[38;5;241m*[39mkwargs,
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[1;32m 575[0m )
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File [0;32m~/src/two_qubit_model/hiro_models/model_base.py:298[0m, in [0;36mModel.try_get_online_data[0;34m(self, path, results_path)[0m
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[1;32m 296[0m file_path [38;5;241m=[39m os[38;5;241m.[39mpath[38;5;241m.[39mjoin(path, results_path)
|
||||
[1;32m 297[0m [38;5;28;01mif[39;00m [38;5;129;01mnot[39;00m os[38;5;241m.[39mpath[38;5;241m.[39mexists(file_path):
|
||||
[0;32m--> 298[0m [38;5;28;01mraise[39;00m [38;5;167;01mRuntimeError[39;00m([38;5;124mf[39m[38;5;124m"[39m[38;5;124mNo data found under [39m[38;5;124m'[39m[38;5;132;01m{[39;00mfile_path[38;5;132;01m}[39;00m[38;5;124m'[39m[38;5;124m.[39m[38;5;124m"[39m)
|
||||
[1;32m 300[0m [38;5;28;01mreturn[39;00m hopsflow[38;5;241m.[39mutil[38;5;241m.[39mget_online_values_from_cache(file_path)
|
||||
|
||||
[0;31mRuntimeError[0m: No data found under 'results/interaction_power_1c98408e7172b7ca2a5507aed3dcd2b5a45ba1fded942d635720693e91be50c2.npz'.
|
||||
80000 -0.0035256859094574657 0.4 0.5
|
||||
80000 -0.003003232549170266 0.45 0.5
|
||||
80000 -0.002486223631053281 0.5 0.5
|
||||
80000 -0.002031171680593496 0.55 0.5
|
||||
80000 -0.0015762813191599482 0.6 0.5
|
||||
[WARNING root 142566] Adding values with unequal snapshot count discards the snapshots.
|
||||
80000 -0.004799000397073388 0.4 0.75
|
||||
80000 -0.0043251633398041734 0.45 0.75
|
||||
80000 -0.0038327711397568402 0.5 0.75
|
||||
80000 -0.0034164331023658415 0.55 0.75
|
||||
80000 -0.0030187130898665132 0.6 0.75
|
||||
80000 -0.004801786634051003 0.4 1.0
|
||||
80000 -0.00434091475109094 0.45 1.0
|
||||
80000 -0.003910766374706591 0.5 1.0
|
||||
80000 -0.0034755454875544786 0.55 1.0
|
||||
80000 -0.0030651376043712942 0.6 1.0
|
||||
80000 -0.004734363159180772 0.4 1.25
|
||||
80000 -0.004263187042045658 0.45 1.25
|
||||
80000 -0.003857041901181338 0.5 1.25
|
||||
80000 -0.00346715373726747 0.55 1.25
|
||||
80000 -0.003096942043813691 0.6 1.25
|
||||
[WARNING root 142566] Adding values with unequal snapshot count discards the snapshots.
|
||||
80000 -0.004676219366752152 0.4 1.5
|
||||
80000 -0.004230301763725065 0.45 1.5
|
||||
80000 -0.0038056213003110195 0.5 1.5
|
||||
80000 -0.0034230466153926742 0.55 1.5
|
||||
80000 -0.003075466706937633 0.6 1.5
|
||||
#+end_example
|
||||
[[file:./.ob-jupyter/3f12e992b6683aa19bdb72118d76e5b70849f69c.svg]]
|
||||
[[file:./.ob-jupyter/551a6d3eda70b32bf49c903c03bd14899634183c.svg]]
|
||||
:END:
|
||||
|
||||
#+begin_src jupyter-python
|
||||
fig, ax = plt.subplots()
|
||||
for model in models[:22]:
|
||||
for model in models:
|
||||
pu.plot_with_σ(models[0].t, model.system_energy(), ax=ax)
|
||||
#+end_src
|
||||
|
||||
#+RESULTS:
|
||||
[[file:./.ob-jupyter/31011c08fcf8cb9aab5b6fb5e9479c830b5523ce.svg]]
|
||||
|
||||
#+begin_src jupyter-python
|
||||
for model in models:
|
||||
plt.plot(model.t, abs(model.total_energy_from_power().value - model.total_energy().value))
|
||||
#+end_src
|
||||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
# [goto error]
|
||||
#+begin_example
|
||||
[0;31m---------------------------------------------------------------------------[0m
|
||||
[0;31mRuntimeError[0m Traceback (most recent call last)
|
||||
Cell [0;32mIn[11], line 3[0m
|
||||
[1;32m 1[0m fig, ax [38;5;241m=[39m plt[38;5;241m.[39msubplots()
|
||||
[1;32m 2[0m [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[:[38;5;241m22[39m]:
|
||||
[0;32m----> 3[0m pu[38;5;241m.[39mplot_with_σ(models[[38;5;241m0[39m][38;5;241m.[39mt, [43mmodel[49m[38;5;241;43m.[39;49m[43msystem_energy[49m[43m([49m[43m)[49m, ax[38;5;241m=[39max)
|
||||
|
||||
File [0;32m~/src/two_qubit_model/hiro_models/model_base.py:315[0m, in [0;36mModel.system_energy[0;34m(self, data, results_path, **kwargs)[0m
|
||||
[1;32m 305[0m [38;5;124;03m"""Calculates the system energy from the hierarchy data[39;00m
|
||||
[1;32m 306[0m [38;5;124;03m``data`` or, if not supplied, tries to load the online results from ``results_path``.[39;00m
|
||||
[1;32m 307[0m
|
||||
[0;32m (...)[0m
|
||||
[1;32m 311[0m [38;5;124;03m:returns: See :any:`hopsflow.util.ensemble_mean`.[39;00m
|
||||
[1;32m 312[0m [38;5;124;03m"""[39;00m
|
||||
[1;32m 314[0m [38;5;28;01mif[39;00m data [38;5;129;01mis[39;00m [38;5;28;01mNone[39;00m:
|
||||
[0;32m--> 315[0m [38;5;28;01mreturn[39;00m [38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43mtry_get_online_data[49m[43m([49m[43mresults_path[49m[43m,[49m[43m [49m[38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43monline_system_name[49m[43m)[49m
|
||||
[1;32m 317[0m operator [38;5;241m=[39m [38;5;28mself[39m[38;5;241m.[39msystem
|
||||
[1;32m 318[0m [38;5;28;01mreturn[39;00m [38;5;28mself[39m[38;5;241m.[39msystem_expectation(data, operator, real[38;5;241m=[39m[38;5;28;01mTrue[39;00m, [38;5;241m*[39m[38;5;241m*[39mkwargs)
|
||||
|
||||
File [0;32m~/src/two_qubit_model/hiro_models/model_base.py:298[0m, in [0;36mModel.try_get_online_data[0;34m(self, path, results_path)[0m
|
||||
[1;32m 296[0m file_path [38;5;241m=[39m os[38;5;241m.[39mpath[38;5;241m.[39mjoin(path, results_path)
|
||||
[1;32m 297[0m [38;5;28;01mif[39;00m [38;5;129;01mnot[39;00m os[38;5;241m.[39mpath[38;5;241m.[39mexists(file_path):
|
||||
[0;32m--> 298[0m [38;5;28;01mraise[39;00m [38;5;167;01mRuntimeError[39;00m([38;5;124mf[39m[38;5;124m"[39m[38;5;124mNo data found under [39m[38;5;124m'[39m[38;5;132;01m{[39;00mfile_path[38;5;132;01m}[39;00m[38;5;124m'[39m[38;5;124m.[39m[38;5;124m"[39m)
|
||||
[1;32m 300[0m [38;5;28;01mreturn[39;00m hopsflow[38;5;241m.[39mutil[38;5;241m.[39mget_online_values_from_cache(file_path)
|
||||
|
||||
[0;31mRuntimeError[0m: No data found under 'results/system_1c98408e7172b7ca2a5507aed3dcd2b5a45ba1fded942d635720693e91be50c2.npz'.
|
||||
#+end_example
|
||||
[[file:./.ob-jupyter/bd5dd629f6ab7c9804f51e1ce295e899dd88b2c4.svg]]
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
[[file:./.ob-jupyter/5f60ec2379fadc805d6dd4073ac4a3fc64e04b29.svg]]
|
||||
:END:
|
||||
|
||||
|
||||
#+begin_src jupyter-python
|
||||
fig, ax = plt.subplots()
|
||||
styles = [".", "*"]
|
||||
|
|
@ -234,81 +198,7 @@ coupling-change/cycle time.
|
|||
#+end_src
|
||||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
# [goto error]
|
||||
#+begin_example
|
||||
[0;31m---------------------------------------------------------------------------[0m
|
||||
[0;31mEOFError[0m Traceback (most recent call last)
|
||||
File [0;32m/nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/numpy/lib/npyio.py:441[0m, in [0;36mload[0;34m(file, mmap_mode, allow_pickle, fix_imports, encoding, max_header_size)[0m
|
||||
[1;32m 440[0m [38;5;28;01mtry[39;00m:
|
||||
[0;32m--> 441[0m [38;5;28;01mreturn[39;00m [43mpickle[49m[38;5;241;43m.[39;49m[43mload[49m[43m([49m[43mfid[49m[43m,[49m[43m [49m[38;5;241;43m*[39;49m[38;5;241;43m*[39;49m[43mpickle_kwargs[49m[43m)[49m
|
||||
[1;32m 442[0m [38;5;28;01mexcept[39;00m [38;5;167;01mException[39;00m [38;5;28;01mas[39;00m e:
|
||||
|
||||
[0;31mEOFError[0m: Ran out of input
|
||||
|
||||
The above exception was the direct cause of the following exception:
|
||||
|
||||
[0;31mUnpicklingError[0m Traceback (most recent call last)
|
||||
Cell [0;32mIn[21], line 5[0m
|
||||
[1;32m 3[0m [38;5;28;01mfor[39;00m bath, style [38;5;129;01min[39;00m [38;5;28menumerate[39m(styles):
|
||||
[1;32m 4[0m [38;5;28;01mfor[39;00m i, T [38;5;129;01min[39;00m [38;5;28menumerate[39m(Ts):
|
||||
[0;32m----> 5[0m inters [38;5;241m=[39m np[38;5;241m.[39marray([[38;5;28mabs[39m(model[38;5;241m.[39minteraction_energy()[38;5;241m.[39mfor_bath(bath)[38;5;241m.[39mslice([38;5;28mslice[39m(model[38;5;241m.[39mstrobe[[38;5;241m1[39m][[38;5;241m2[39m], [38;5;241m-[39m[38;5;241m1[39m)))[38;5;241m.[39mmax[38;5;241m.[39mvalue [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[i::[38;5;28mlen[39m(Ts)]])
|
||||
[1;32m 6[0m bcf_scales [38;5;241m=[39m np[38;5;241m.[39marray([(model[38;5;241m.[39mbcf_scales[bath]) [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[i::[38;5;28mlen[39m(Ts)]])
|
||||
[1;32m 7[0m ωs_filter [38;5;241m=[39m [model[38;5;241m.[39mω_c[[38;5;241m0[39m] [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[::[38;5;28mlen[39m(Ts)]]
|
||||
|
||||
Cell [0;32mIn[21], line 5[0m, in [0;36m<listcomp>[0;34m(.0)[0m
|
||||
[1;32m 3[0m [38;5;28;01mfor[39;00m bath, style [38;5;129;01min[39;00m [38;5;28menumerate[39m(styles):
|
||||
[1;32m 4[0m [38;5;28;01mfor[39;00m i, T [38;5;129;01min[39;00m [38;5;28menumerate[39m(Ts):
|
||||
[0;32m----> 5[0m inters [38;5;241m=[39m np[38;5;241m.[39marray([[38;5;28mabs[39m([43mmodel[49m[38;5;241;43m.[39;49m[43minteraction_energy[49m[43m([49m[43m)[49m[38;5;241m.[39mfor_bath(bath)[38;5;241m.[39mslice([38;5;28mslice[39m(model[38;5;241m.[39mstrobe[[38;5;241m1[39m][[38;5;241m2[39m], [38;5;241m-[39m[38;5;241m1[39m)))[38;5;241m.[39mmax[38;5;241m.[39mvalue [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[i::[38;5;28mlen[39m(Ts)]])
|
||||
[1;32m 6[0m bcf_scales [38;5;241m=[39m np[38;5;241m.[39marray([(model[38;5;241m.[39mbcf_scales[bath]) [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[i::[38;5;28mlen[39m(Ts)]])
|
||||
[1;32m 7[0m ωs_filter [38;5;241m=[39m [model[38;5;241m.[39mω_c[[38;5;241m0[39m] [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models[::[38;5;28mlen[39m(Ts)]]
|
||||
|
||||
File [0;32m~/src/two_qubit_model/hiro_models/model_base.py:533[0m, in [0;36mModel.interaction_energy[0;34m(self, data, results_path, **kwargs)[0m
|
||||
[1;32m 523[0m [38;5;124;03m"""Calculates interaction energy from the hierarchy data[39;00m
|
||||
[1;32m 524[0m [38;5;124;03m``data`` or, if not supplied, tries to load the online results from ``results_path``.[39;00m
|
||||
[1;32m 525[0m
|
||||
[0;32m (...)[0m
|
||||
[1;32m 529[0m [38;5;124;03m:returns: See :any:`hopsflow.util.interaction_energy_ensemble`.[39;00m
|
||||
[1;32m 530[0m [38;5;124;03m"""[39;00m
|
||||
[1;32m 532[0m [38;5;28;01mif[39;00m data [38;5;129;01mis[39;00m [38;5;28;01mNone[39;00m:
|
||||
[0;32m--> 533[0m [38;5;28;01mreturn[39;00m [38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43mtry_get_online_data[49m[43m([49m[43mresults_path[49m[43m,[49m[43m [49m[38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43monline_interaction_name[49m[43m)[49m
|
||||
[1;32m 535[0m N, kwargs [38;5;241m=[39m _get_N_kwargs(kwargs, data)
|
||||
[1;32m 537[0m [38;5;28;01mreturn[39;00m hopsflow[38;5;241m.[39mhopsflow[38;5;241m.[39minteraction_energy_ensemble(
|
||||
[1;32m 538[0m data[38;5;241m.[39mvalid_sample_iterator(data[38;5;241m.[39mstoc_traj), [38;5;66;03m# type: ignore[39;00m
|
||||
[1;32m 539[0m data[38;5;241m.[39mvalid_sample_iterator(data[38;5;241m.[39maux_states), [38;5;66;03m# type: ignore[39;00m
|
||||
[0;32m (...)[0m
|
||||
[1;32m 544[0m [38;5;241m*[39m[38;5;241m*[39mkwargs,
|
||||
[1;32m 545[0m )
|
||||
|
||||
File [0;32m~/src/two_qubit_model/hiro_models/model_base.py:300[0m, in [0;36mModel.try_get_online_data[0;34m(self, path, results_path)[0m
|
||||
[1;32m 297[0m [38;5;28;01mif[39;00m [38;5;129;01mnot[39;00m os[38;5;241m.[39mpath[38;5;241m.[39mexists(file_path):
|
||||
[1;32m 298[0m [38;5;28;01mraise[39;00m [38;5;167;01mRuntimeError[39;00m([38;5;124mf[39m[38;5;124m"[39m[38;5;124mNo data found under [39m[38;5;124m'[39m[38;5;132;01m{[39;00mfile_path[38;5;132;01m}[39;00m[38;5;124m'[39m[38;5;124m.[39m[38;5;124m"[39m)
|
||||
[0;32m--> 300[0m [38;5;28;01mreturn[39;00m [43mhopsflow[49m[38;5;241;43m.[39;49m[43mutil[49m[38;5;241;43m.[39;49m[43mget_online_values_from_cache[49m[43m([49m[43mfile_path[49m[43m)[49m
|
||||
|
||||
File [0;32m~/src/hopsflow/hopsflow/util.py:902[0m, in [0;36mget_online_values_from_cache[0;34m(path)[0m
|
||||
[1;32m 899[0m vals [38;5;241m=[39m []
|
||||
[1;32m 901[0m [38;5;28;01mfor[39;00m path [38;5;129;01min[39;00m all_versions:
|
||||
[0;32m--> 902[0m agg [38;5;241m=[39m [43mWelfordAggregator[49m[38;5;241;43m.[39;49m[43mfrom_dump[49m[43m([49m[38;5;28;43mstr[39;49m[43m([49m[43mpath[49m[43m)[49m[43m)[49m
|
||||
[1;32m 903[0m vals[38;5;241m.[39mappend([agg[38;5;241m.[39mn, agg[38;5;241m.[39mmean, agg[38;5;241m.[39mensemble_std])
|
||||
[1;32m 904[0m vals[38;5;241m.[39msort(key[38;5;241m=[39m[38;5;28;01mlambda[39;00m el: el[[38;5;241m0[39m])
|
||||
|
||||
File [0;32m~/src/hopsflow/hopsflow/util.py:730[0m, in [0;36mWelfordAggregator.from_dump[0;34m(cls, path)[0m
|
||||
[1;32m 728[0m instance [38;5;241m=[39m [38;5;28mcls[39m(np[38;5;241m.[39mempty([38;5;241m1[39m))
|
||||
[1;32m 729[0m [38;5;28;01mwith[39;00m portalocker[38;5;241m.[39mLock(path, [38;5;124m"[39m[38;5;124mrb[39m[38;5;124m"[39m, flags[38;5;241m=[39mportalocker[38;5;241m.[39mLockFlags[38;5;241m.[39mEXCLUSIVE) [38;5;28;01mas[39;00m f:
|
||||
[0;32m--> 730[0m dump_file [38;5;241m=[39m [43mnp[49m[38;5;241;43m.[39;49m[43mload[49m[43m([49m[43mf[49m[43m,[49m[43m [49m[43mallow_pickle[49m[38;5;241;43m=[39;49m[38;5;28;43;01mTrue[39;49;00m[43m)[49m
|
||||
[1;32m 732[0m instance[38;5;241m.[39mn [38;5;241m=[39m [38;5;28mint[39m(dump_file[[38;5;124m"[39m[38;5;124mn[39m[38;5;124m"[39m])
|
||||
[1;32m 733[0m instance[38;5;241m.[39mmean [38;5;241m=[39m dump_file[[38;5;124m"[39m[38;5;124mmean[39m[38;5;124m"[39m]
|
||||
|
||||
File [0;32m/nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/numpy/lib/npyio.py:443[0m, in [0;36mload[0;34m(file, mmap_mode, allow_pickle, fix_imports, encoding, max_header_size)[0m
|
||||
[1;32m 441[0m [38;5;28;01mreturn[39;00m pickle[38;5;241m.[39mload(fid, [38;5;241m*[39m[38;5;241m*[39mpickle_kwargs)
|
||||
[1;32m 442[0m [38;5;28;01mexcept[39;00m [38;5;167;01mException[39;00m [38;5;28;01mas[39;00m e:
|
||||
[0;32m--> 443[0m [38;5;28;01mraise[39;00m pickle[38;5;241m.[39mUnpicklingError(
|
||||
[1;32m 444[0m [38;5;124mf[39m[38;5;124m"[39m[38;5;124mFailed to interpret file [39m[38;5;132;01m{[39;00mfile[38;5;132;01m!r}[39;00m[38;5;124m as a pickle[39m[38;5;124m"[39m) [38;5;28;01mfrom[39;00m [38;5;21;01me[39;00m
|
||||
|
||||
[0;31mUnpicklingError[0m: Failed to interpret file <_io.BufferedReader name='results/interaction_5343573c062907a778a707b8bb68db373c0082ab4606d528534812fdb0f94786_60000.npz'> as a pickle
|
||||
#+end_example
|
||||
[[file:./.ob-jupyter/fdd2225c78b3d368377fec25eab6bfb3e5699f7e.svg]]
|
||||
:END:
|
||||
[[file:./.ob-jupyter/3d747faae890aff5b004df68059ffb918e14d0ae.svg]]
|
||||
|
||||
#+begin_src jupyter-python
|
||||
fig, ax = plt.subplots()
|
||||
|
|
@ -352,7 +242,7 @@ coupling-change/cycle time.
|
|||
0.55 [[0.55, 4], [0.55, 4], [0.55, 4], [0.55, 4], [0.55, 4]] 1 *
|
||||
0.6 [[0.6, 4], [0.6, 4], [0.6, 4], [0.6, 4], [0.6, 4]] 1 *
|
||||
#+end_example
|
||||
[[file:./.ob-jupyter/828b5a24bad8964f79a87618f48012aa3d81c549.svg]]
|
||||
[[file:./.ob-jupyter/fcabeb7c6f63fc7bc1d6d2a8f82c5a9eaf839bc7.svg]]
|
||||
:END:
|
||||
|
||||
|
||||
|
|
@ -390,7 +280,7 @@ coupling-change/cycle time.
|
|||
#+end_src
|
||||
|
||||
#+RESULTS:
|
||||
[[file:./.ob-jupyter/582e63e77847cd7744d08b50f6b3a44972a66156.svg]]
|
||||
[[file:./.ob-jupyter/8ef5c4a0dfcaa4b6b15229c7e03690990bda22ea.svg]]
|
||||
|
||||
#+begin_src jupyter-python
|
||||
def thermal_state(T, Ω):
|
||||
|
|
@ -444,17 +334,17 @@ coupling-change/cycle time.
|
|||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
: /nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/cbook/__init__.py:1369: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: /nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/cbook/__init__.py:1369: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: return np.asarray(x, float)
|
||||
: /nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5340: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: /nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5340: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: pts[0] = start
|
||||
: /nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5341: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: /nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5341: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: pts[N + 1] = end
|
||||
: /nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5344: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: /nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5344: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: pts[1:N+1, 1] = dep1slice
|
||||
: /nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5346: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: /nix/store/fai1b55231rnk4jyj0kjicdnqcgdf9ph-python3-3.9.15-env/lib/python3.9/site-packages/matplotlib/axes/_axes.py:5346: ComplexWarning: Casting complex values to real discards the imaginary part
|
||||
: pts[N+2:, 1] = dep2slice[::-1]
|
||||
[[file:./.ob-jupyter/87ee9582d91c2e1b413352d63ce90bec9395a473.svg]]
|
||||
[[file:./.ob-jupyter/045efebdb7009899f180780898a31b7f6c48e106.svg]]
|
||||
:END:
|
||||
|
||||
|
||||
|
|
@ -510,7 +400,7 @@ coupling-change/cycle time.
|
|||
#+end_src
|
||||
|
||||
#+RESULTS:
|
||||
[[file:./.ob-jupyter/b9ca63a22b07896f059e501f293122a207f60016.svg]]
|
||||
[[file:./.ob-jupyter/2a877ebd7c84b122825c60319a419fe5cd199876.svg]]
|
||||
|
||||
|
||||
#+begin_src jupyter-python
|
||||
|
|
@ -520,7 +410,7 @@ coupling-change/cycle time.
|
|||
#+RESULTS:
|
||||
:RESULTS:
|
||||
| <Figure | size | 340x320 | with | 2 | Axes> | <AxesSubplot: | xlabel= | $\omega_c$ | ylabel= | $\bar{P}$ | > | (<AxesSubplot: xlabel= $\omega_c$ ylabel= $\bar{P}$ > <AxesSubplot: ylabel= $\eta$ >) |
|
||||
[[file:./.ob-jupyter/69b499338780926af7bb8c3936bf6c23a27c7d9e.svg]]
|
||||
[[file:./.ob-jupyter/6eccb61abca525820e2df7e9a93704f42eefc925.svg]]
|
||||
:END:
|
||||
|
||||
|
||||
|
|
@ -531,8 +421,14 @@ coupling-change/cycle time.
|
|||
|
||||
#+RESULTS:
|
||||
:RESULTS:
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 241349] Adding values with unequal snapshot count discards the snapshots.
|
||||
| <Figure | size | 340x320 | with | 2 | Axes> | (<AxesSubplot: xlabel= $N$ ylabel= $P$ > <AxesSubplot: xlabel= $N$ ylabel= $\eta$ >) |
|
||||
[[file:./.ob-jupyter/8146b7071cda2606563186cddc75c7551a4508b8.svg]]
|
||||
[[file:./.ob-jupyter/c11f1a91e2f5aff480076974436ee62a17d4f1be.svg]]
|
||||
:END:
|
||||
|
||||
|
||||
|
|
@ -571,7 +467,15 @@ coupling-change/cycle time.
|
|||
#+end_src
|
||||
|
||||
#+RESULTS:
|
||||
[[file:./.ob-jupyter/28cfefab23d9ed0190a04f826614e6220cd36555.svg]]
|
||||
:RESULTS:
|
||||
: [WARNING root 269253] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 269253] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 269253] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 269253] Dividing values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 269253] Adding values with unequal snapshot count discards the snapshots.
|
||||
: [WARNING root 269253] Dividing values with unequal snapshot count discards the snapshots.
|
||||
[[file:./.ob-jupyter/9f7b5b9ac4f5aeaf6b4769542196b14333e652d3.svg]]
|
||||
:END:
|
||||
|
||||
#+begin_src jupyter-python
|
||||
for model in models:
|
||||
|
|
@ -583,161 +487,31 @@ coupling-change/cycle time.
|
|||
:RESULTS:
|
||||
: /home/hiro/Documents/Projects/UNI/master/eflow_paper/python/otto_motor/subprojects/bath_memory/plot_utils.py:38: RuntimeWarning: More than 20 figures have been opened. Figures created through the pyplot interface (`matplotlib.pyplot.figure`) are retained until explicitly closed and may consume too much memory. (To control this warning, see the rcParam `figure.max_open_warning`). Consider using `matplotlib.pyplot.close()`.
|
||||
: fig, ax = setup_function()
|
||||
# [goto error]
|
||||
#+begin_example
|
||||
[0;31m---------------------------------------------------------------------------[0m
|
||||
[0;31mOSError[0m Traceback (most recent call last)
|
||||
File [0;32m~/src/two_qubit_model/hiro_models/model_auxiliary.py:221[0m, in [0;36mget_data[0;34m(model, data_path, read_only, **kwargs)[0m
|
||||
[1;32m 220[0m [38;5;28;01mtry[39;00m:
|
||||
[0;32m--> 221[0m [38;5;28;01mreturn[39;00m [43mHIData[49m[43m([49m[43mpath[49m[43m,[49m[43m [49m[43mread_only[49m[38;5;241;43m=[39;49m[43mread_only[49m[43m,[49m[43m [49m[43mrobust[49m[38;5;241;43m=[39;49m[38;5;28;43;01mFalse[39;49;00m[43m,[49m[43m [49m[38;5;241;43m*[39;49m[38;5;241;43m*[39;49m[43mkwargs[49m[43m)[49m
|
||||
[1;32m 222[0m [38;5;28;01mexcept[39;00m:
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/hierarchy_data.py:255[0m, in [0;36mHIData.__init__[0;34m(self, hdf5_name, read_only, hi_key, hi_key_bin, hi_key_bin_hash, check_consistency, overwrite_key, robust, stream_file)[0m
|
||||
[1;32m 254[0m [38;5;28;01mif[39;00m [38;5;129;01mnot[39;00m hi_key:
|
||||
[0;32m--> 255[0m [38;5;28;01mwith[39;00m [43mh5py[49m[38;5;241;43m.[39;49m[43mFile[49m[43m([49m[43mhdf5_name[49m[43m,[49m[43m [49m[38;5;124;43m"[39;49m[38;5;124;43mr[39;49m[38;5;124;43m"[39;49m[43m,[49m[43m [49m[43mlibver[49m[38;5;241;43m=[39;49m[38;5;124;43m"[39;49m[38;5;124;43mlatest[39;49m[38;5;124;43m"[39;49m[43m)[49m [38;5;28;01mas[39;00m h5File:
|
||||
[1;32m 256[0m [38;5;28;01mtry[39;00m:
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/h5py/_hl/files.py:533[0m, in [0;36mFile.__init__[0;34m(self, name, mode, driver, libver, userblock_size, swmr, rdcc_nslots, rdcc_nbytes, rdcc_w0, track_order, fs_strategy, fs_persist, fs_threshold, fs_page_size, page_buf_size, min_meta_keep, min_raw_keep, locking, alignment_threshold, alignment_interval, **kwds)[0m
|
||||
[1;32m 530[0m fcpl [38;5;241m=[39m make_fcpl(track_order[38;5;241m=[39mtrack_order, fs_strategy[38;5;241m=[39mfs_strategy,
|
||||
[1;32m 531[0m fs_persist[38;5;241m=[39mfs_persist, fs_threshold[38;5;241m=[39mfs_threshold,
|
||||
[1;32m 532[0m fs_page_size[38;5;241m=[39mfs_page_size)
|
||||
[0;32m--> 533[0m fid [38;5;241m=[39m [43mmake_fid[49m[43m([49m[43mname[49m[43m,[49m[43m [49m[43mmode[49m[43m,[49m[43m [49m[43muserblock_size[49m[43m,[49m[43m [49m[43mfapl[49m[43m,[49m[43m [49m[43mfcpl[49m[43m,[49m[43m [49m[43mswmr[49m[38;5;241;43m=[39;49m[43mswmr[49m[43m)[49m
|
||||
[1;32m 535[0m [38;5;28;01mif[39;00m [38;5;28misinstance[39m(libver, [38;5;28mtuple[39m):
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/h5py/_hl/files.py:226[0m, in [0;36mmake_fid[0;34m(name, mode, userblock_size, fapl, fcpl, swmr)[0m
|
||||
[1;32m 225[0m flags [38;5;241m|[39m[38;5;241m=[39m h5f[38;5;241m.[39mACC_SWMR_READ
|
||||
[0;32m--> 226[0m fid [38;5;241m=[39m [43mh5f[49m[38;5;241;43m.[39;49m[43mopen[49m[43m([49m[43mname[49m[43m,[49m[43m [49m[43mflags[49m[43m,[49m[43m [49m[43mfapl[49m[38;5;241;43m=[39;49m[43mfapl[49m[43m)[49m
|
||||
[1;32m 227[0m [38;5;28;01melif[39;00m mode [38;5;241m==[39m [38;5;124m'[39m[38;5;124mr+[39m[38;5;124m'[39m:
|
||||
|
||||
File [0;32mh5py/_objects.pyx:54[0m, in [0;36mh5py._objects.with_phil.wrapper[0;34m()[0m
|
||||
|
||||
File [0;32mh5py/_objects.pyx:55[0m, in [0;36mh5py._objects.with_phil.wrapper[0;34m()[0m
|
||||
|
||||
File [0;32mh5py/h5f.pyx:106[0m, in [0;36mh5py.h5f.open[0;34m()[0m
|
||||
|
||||
[0;31mOSError[0m: Unable to open file (file is already open for write (may use <h5clear file> to clear file consistency flags))
|
||||
|
||||
During handling of the above exception, another exception occurred:
|
||||
|
||||
[0;31mOSError[0m Traceback (most recent call last)
|
||||
Cell [0;32mIn[33], line 2[0m
|
||||
[1;32m 1[0m [38;5;28;01mfor[39;00m model [38;5;129;01min[39;00m models:
|
||||
[0;32m----> 2[0m [43mot[49m[38;5;241;43m.[39;49m[43mplot_bloch_components[49m[43m([49m[43mmodel[49m[43m)[49m
|
||||
|
||||
File [0;32m~/Documents/Projects/UNI/master/eflow_paper/python/otto_motor/subprojects/bath_memory/plot_utils.py:40[0m, in [0;36mwrap_plot.<locals>.wrapped[0;34m(ax, setup_function, *args, **kwargs)[0m
|
||||
[1;32m 37[0m [38;5;28;01mif[39;00m [38;5;129;01mnot[39;00m ax:
|
||||
[1;32m 38[0m fig, ax [38;5;241m=[39m setup_function()
|
||||
[0;32m---> 40[0m ret_val [38;5;241m=[39m [43mf[49m[43m([49m[38;5;241;43m*[39;49m[43margs[49m[43m,[49m[43m [49m[43max[49m[38;5;241;43m=[39;49m[43max[49m[43m,[49m[43m [49m[38;5;241;43m*[39;49m[38;5;241;43m*[39;49m[43mkwargs[49m[43m)[49m
|
||||
[1;32m 41[0m [38;5;28;01mreturn[39;00m (fig, ax, ret_val) [38;5;28;01mif[39;00m ret_val [38;5;28;01melse[39;00m (fig, ax)
|
||||
|
||||
File [0;32m~/Documents/Projects/UNI/master/eflow_paper/python/otto_motor/subprojects/bath_memory/otto_utilities.py:553[0m, in [0;36mplot_bloch_components[0;34m(model, ax, **kwargs)[0m
|
||||
[1;32m 551[0m [38;5;129m@pu[39m[38;5;241m.[39mwrap_plot
|
||||
[1;32m 552[0m [38;5;28;01mdef[39;00m [38;5;21mplot_bloch_components[39m(model, ax[38;5;241m=[39m[38;5;28;01mNone[39;00m, [38;5;241m*[39m[38;5;241m*[39mkwargs):
|
||||
[0;32m--> 553[0m [38;5;28;01mwith[39;00m [43maux[49m[38;5;241;43m.[39;49m[43mget_data[49m[43m([49m[43mmodel[49m[43m)[49m [38;5;28;01mas[39;00m data:
|
||||
[1;32m 554[0m ρ [38;5;241m=[39m data[38;5;241m.[39mrho_t_accum[38;5;241m.[39mmean[:]
|
||||
[1;32m 555[0m σ_ρ [38;5;241m=[39m data[38;5;241m.[39mrho_t_accum[38;5;241m.[39mensemble_std[:]
|
||||
|
||||
File [0;32m~/src/two_qubit_model/hiro_models/model_auxiliary.py:223[0m, in [0;36mget_data[0;34m(model, data_path, read_only, **kwargs)[0m
|
||||
[1;32m 221[0m [38;5;28;01mreturn[39;00m HIData(path, read_only[38;5;241m=[39mread_only, robust[38;5;241m=[39m[38;5;28;01mFalse[39;00m, [38;5;241m*[39m[38;5;241m*[39mkwargs)
|
||||
[1;32m 222[0m [38;5;28;01mexcept[39;00m:
|
||||
[0;32m--> 223[0m [38;5;28;01mreturn[39;00m [43mHIData[49m[43m([49m
|
||||
[1;32m 224[0m [43m [49m[43mpath[49m[43m,[49m
|
||||
[1;32m 225[0m [43m [49m[43mhi_key[49m[38;5;241;43m=[39;49m[43mmodel[49m[38;5;241;43m.[39;49m[43mhops_config[49m[43m,[49m
|
||||
[1;32m 226[0m [43m [49m[43mread_only[49m[38;5;241;43m=[39;49m[38;5;28;43;01mFalse[39;49;00m[43m,[49m
|
||||
[1;32m 227[0m [43m [49m[43mcheck_consistency[49m[38;5;241;43m=[39;49m[38;5;28;43;01mFalse[39;49;00m[43m,[49m
|
||||
[1;32m 228[0m [43m [49m[43moverwrite_key[49m[38;5;241;43m=[39;49m[38;5;28;43;01mTrue[39;49;00m[43m,[49m
|
||||
[1;32m 229[0m [43m [49m[43mrobust[49m[38;5;241;43m=[39;49m[38;5;28;43;01mFalse[39;49;00m[43m,[49m
|
||||
[1;32m 230[0m [43m [49m[38;5;241;43m*[39;49m[38;5;241;43m*[39;49m[43mkwargs[49m[43m,[49m
|
||||
[1;32m 231[0m [43m [49m[43m)[49m
|
||||
[1;32m 233[0m [38;5;28;01melse[39;00m:
|
||||
[1;32m 234[0m [38;5;28;01mraise[39;00m [38;5;167;01mRuntimeError[39;00m([38;5;124mf[39m[38;5;124m"[39m[38;5;124mNo data found for model with hash [39m[38;5;124m'[39m[38;5;132;01m{[39;00mhexhash[38;5;132;01m}[39;00m[38;5;124m'[39m[38;5;124m.[39m[38;5;124m"[39m)
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/hierarchy_data.py:416[0m, in [0;36mHIData.__init__[0;34m(self, hdf5_name, read_only, hi_key, hi_key_bin, hi_key_bin_hash, check_consistency, overwrite_key, robust, stream_file)[0m
|
||||
[1;32m 404[0m [38;5;124;03m"""The time points on which the trajectories and everything else are[39;00m
|
||||
[1;32m 405[0m [38;5;124;03mgiven.[39;00m
|
||||
[1;32m 406[0m
|
||||
[0;32m (...)[0m
|
||||
[1;32m 412[0m [38;5;124;03m:any:`time_set`.[39;00m
|
||||
[1;32m 413[0m [38;5;124;03m"""[39;00m
|
||||
[1;32m 415[0m [38;5;28mself[39m[38;5;241m.[39m_init_bcf_terms_and_aux_states()
|
||||
[0;32m--> 416[0m [38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43m_open_file[49m[43m([49m[43mread_only[49m[43m,[49m[43m [49m[43mhi_key_bin[49m[43m,[49m[43m [49m[43mhi_key_bin_hash[49m[43m,[49m[43m [49m[43moverwrite_key[49m[43m,[49m[43m [49m[43mrobust[49m[43m)[49m
|
||||
[1;32m 418[0m [38;5;28;01mif[39;00m check_consistency:
|
||||
[1;32m 419[0m [38;5;28mself[39m[38;5;241m.[39m_check_consistency(hi_key_bin, hi_key_bin_hash)
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/hierarchy_data.py:552[0m, in [0;36mHIData._open_file[0;34m(self, read_only, hi_key_bin, hi_key_bin_hash, overwrite_key, backup_if_error)[0m
|
||||
[1;32m 550[0m [38;5;28;01mif[39;00m [38;5;129;01mnot[39;00m read_only:
|
||||
[1;32m 551[0m [38;5;28;01mtry[39;00m:
|
||||
[0;32m--> 552[0m p [38;5;241m=[39m [43mtest_file_version[49m[43m([49m[38;5;28;43mself[39;49m[38;5;241;43m.[39;49m[43mhdf5_name[49m[43m)[49m
|
||||
[1;32m 553[0m [38;5;28;01mif[39;00m p:
|
||||
[1;32m 554[0m warnings[38;5;241m.[39mwarn(
|
||||
[1;32m 555[0m [38;5;124m"[39m[38;5;124mcan not check version! process list [39m[38;5;132;01m{}[39;00m[38;5;124m has access to hdf5 file [39m[38;5;132;01m{}[39;00m[38;5;124m"[39m[38;5;241m.[39mformat(
|
||||
[1;32m 556[0m p, [38;5;28mself[39m[38;5;241m.[39mhdf5_name
|
||||
[1;32m 557[0m )
|
||||
[1;32m 558[0m )
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/hops/core/hierarchy_data.py:1543[0m, in [0;36mtest_file_version[0;34m(hdf5_name)[0m
|
||||
[1;32m 1538[0m [38;5;28;01mif[39;00m [38;5;28mlen[39m(p) [38;5;241m>[39m [38;5;241m0[39m:
|
||||
[1;32m 1539[0m [38;5;66;03m# another process accesses the file, assume that the file has allready the new format,[39;00m
|
||||
[1;32m 1540[0m [38;5;66;03m# since that other process has already changed it[39;00m
|
||||
[1;32m 1541[0m [38;5;28;01mreturn[39;00m p
|
||||
[0;32m-> 1543[0m [38;5;28;01mwith[39;00m [43mh5py[49m[38;5;241;43m.[39;49m[43mFile[49m[43m([49m[43mhdf5_name[49m[43m,[49m[43m [49m[38;5;124;43m"[39;49m[38;5;124;43mr+[39;49m[38;5;124;43m"[39;49m[43m,[49m[43m [49m[43mlibver[49m[38;5;241;43m=[39;49m[38;5;124;43m"[39;49m[38;5;124;43mlatest[39;49m[38;5;124;43m"[39;49m[43m)[49m [38;5;28;01mas[39;00m h5File:
|
||||
[1;32m 1544[0m [38;5;66;03m# print("test file, open", hdf5_name, "'r+")[39;00m
|
||||
[1;32m 1545[0m [38;5;28;01mtry[39;00m:
|
||||
[1;32m 1546[0m [38;5;66;03m# print("test file, try to set swmr_mode True")[39;00m
|
||||
[1;32m 1547[0m h5File[38;5;241m.[39mswmr_mode [38;5;241m=[39m [38;5;28;01mTrue[39;00m
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/h5py/_hl/files.py:533[0m, in [0;36mFile.__init__[0;34m(self, name, mode, driver, libver, userblock_size, swmr, rdcc_nslots, rdcc_nbytes, rdcc_w0, track_order, fs_strategy, fs_persist, fs_threshold, fs_page_size, page_buf_size, min_meta_keep, min_raw_keep, locking, alignment_threshold, alignment_interval, **kwds)[0m
|
||||
[1;32m 525[0m fapl [38;5;241m=[39m make_fapl(driver, libver, rdcc_nslots, rdcc_nbytes, rdcc_w0,
|
||||
[1;32m 526[0m locking, page_buf_size, min_meta_keep, min_raw_keep,
|
||||
[1;32m 527[0m alignment_threshold[38;5;241m=[39malignment_threshold,
|
||||
[1;32m 528[0m alignment_interval[38;5;241m=[39malignment_interval,
|
||||
[1;32m 529[0m [38;5;241m*[39m[38;5;241m*[39mkwds)
|
||||
[1;32m 530[0m fcpl [38;5;241m=[39m make_fcpl(track_order[38;5;241m=[39mtrack_order, fs_strategy[38;5;241m=[39mfs_strategy,
|
||||
[1;32m 531[0m fs_persist[38;5;241m=[39mfs_persist, fs_threshold[38;5;241m=[39mfs_threshold,
|
||||
[1;32m 532[0m fs_page_size[38;5;241m=[39mfs_page_size)
|
||||
[0;32m--> 533[0m fid [38;5;241m=[39m [43mmake_fid[49m[43m([49m[43mname[49m[43m,[49m[43m [49m[43mmode[49m[43m,[49m[43m [49m[43muserblock_size[49m[43m,[49m[43m [49m[43mfapl[49m[43m,[49m[43m [49m[43mfcpl[49m[43m,[49m[43m [49m[43mswmr[49m[38;5;241;43m=[39;49m[43mswmr[49m[43m)[49m
|
||||
[1;32m 535[0m [38;5;28;01mif[39;00m [38;5;28misinstance[39m(libver, [38;5;28mtuple[39m):
|
||||
[1;32m 536[0m [38;5;28mself[39m[38;5;241m.[39m_libver [38;5;241m=[39m libver
|
||||
|
||||
File [0;32m/nix/store/32immcyww09pavyq3x5gdn14r3rfy8nl-python3-3.9.15-env/lib/python3.9/site-packages/h5py/_hl/files.py:228[0m, in [0;36mmake_fid[0;34m(name, mode, userblock_size, fapl, fcpl, swmr)[0m
|
||||
[1;32m 226[0m fid [38;5;241m=[39m h5f[38;5;241m.[39mopen(name, flags, fapl[38;5;241m=[39mfapl)
|
||||
[1;32m 227[0m [38;5;28;01melif[39;00m mode [38;5;241m==[39m [38;5;124m'[39m[38;5;124mr+[39m[38;5;124m'[39m:
|
||||
[0;32m--> 228[0m fid [38;5;241m=[39m [43mh5f[49m[38;5;241;43m.[39;49m[43mopen[49m[43m([49m[43mname[49m[43m,[49m[43m [49m[43mh5f[49m[38;5;241;43m.[39;49m[43mACC_RDWR[49m[43m,[49m[43m [49m[43mfapl[49m[38;5;241;43m=[39;49m[43mfapl[49m[43m)[49m
|
||||
[1;32m 229[0m [38;5;28;01melif[39;00m mode [38;5;129;01min[39;00m [[38;5;124m'[39m[38;5;124mw-[39m[38;5;124m'[39m, [38;5;124m'[39m[38;5;124mx[39m[38;5;124m'[39m]:
|
||||
[1;32m 230[0m fid [38;5;241m=[39m h5f[38;5;241m.[39mcreate(name, h5f[38;5;241m.[39mACC_EXCL, fapl[38;5;241m=[39mfapl, fcpl[38;5;241m=[39mfcpl)
|
||||
|
||||
File [0;32mh5py/_objects.pyx:54[0m, in [0;36mh5py._objects.with_phil.wrapper[0;34m()[0m
|
||||
|
||||
File [0;32mh5py/_objects.pyx:55[0m, in [0;36mh5py._objects.with_phil.wrapper[0;34m()[0m
|
||||
|
||||
File [0;32mh5py/h5f.pyx:106[0m, in [0;36mh5py.h5f.open[0;34m()[0m
|
||||
|
||||
[0;31mOSError[0m: Unable to open file (file is already open for write/SWMR write (may use <h5clear file> to clear file consistency flags))
|
||||
#+end_example
|
||||
[[file:./.ob-jupyter/391839204016c027928dce723e2f60989df24238.svg]]
|
||||
[[file:./.ob-jupyter/9cabaf41cf638bbfa616935e4dbca0b60bcfd3cd.svg]]
|
||||
[[file:./.ob-jupyter/397d515cf3f849f2c51109ec484f8cecce7fddae.svg]]
|
||||
[[file:./.ob-jupyter/f387eaadc3e789d6657cc553054130a90f9d954d.svg]]
|
||||
[[file:./.ob-jupyter/5a16efe74b0164bb08689d0240fac7670b841b3b.svg]]
|
||||
[[file:./.ob-jupyter/4150efcade266857daeff2a083dbacb5890d4f0b.svg]]
|
||||
[[file:./.ob-jupyter/ef888b06352df909cb330d223bc51c7a2ce4b964.svg]]
|
||||
[[file:./.ob-jupyter/840187a1542d72f699a7eb68d2a13067ab633e64.svg]]
|
||||
[[file:./.ob-jupyter/aecd112aabeff70627d43b3808a17a0d5ffcd53a.svg]]
|
||||
[[file:./.ob-jupyter/151a897d81d62634709dba7ef6b2ea0860cf7061.svg]]
|
||||
[[file:./.ob-jupyter/3cb4a449492bba16272b7701c096f694fe025415.svg]]
|
||||
[[file:./.ob-jupyter/48a2d5d58391caa1218752b06fca5c80fad369c1.svg]]
|
||||
[[file:./.ob-jupyter/154c3792555d3122b19ac015cb5cba784852433f.svg]]
|
||||
[[file:./.ob-jupyter/b9d0c73884c96e71bb4d517ade6d0ff1641e6936.svg]]
|
||||
[[file:./.ob-jupyter/d56c099c7f74f44c3067a8da8efcef6ec451eba2.svg]]
|
||||
[[file:./.ob-jupyter/c55409a2e0a9df91920de0513761c0410b31887a.svg]]
|
||||
[[file:./.ob-jupyter/157f23707f76f0d13ed9bf18c950c4c744a6e165.svg]]
|
||||
[[file:./.ob-jupyter/ef56e6d0cc0f6b2ad02ed7d9ec09787d1a9fc2ab.svg]]
|
||||
[[file:./.ob-jupyter/d82c24f06bcd2def905b57ebe722fd0f2f291259.svg]]
|
||||
[[file:./.ob-jupyter/70060d2704674ed3f3d250adcdb0769f3e394332.svg]]
|
||||
[[file:./.ob-jupyter/e9f5e3979a389f3825659c508f36ce78c0db6808.svg]]
|
||||
[[file:./.ob-jupyter/07ca0ea14076941372969a52b2c15e5b5518f8fd.svg]]
|
||||
[[file:./.ob-jupyter/d5aa80f97eecfd980f1543c8892cd434d05d5552.svg]]
|
||||
[[file:./.ob-jupyter/0df7cfe50115ce562288e0ee5ac51256a864dbe6.svg]]
|
||||
[[file:./.ob-jupyter/7b586b9d458aae65d6bb03350905bc132f897b19.svg]]
|
||||
[[file:./.ob-jupyter/7312898112e29a7fbe0c551bdea7727170f51aa5.svg]]
|
||||
[[file:./.ob-jupyter/ab1364d48bac7a0407d12bfc571ff22839ef0b9e.svg]]
|
||||
[[file:./.ob-jupyter/5130570263d371cf29b5f885fbe3a17b14e1525c.svg]]
|
||||
[[file:./.ob-jupyter/ec66deb9232d33e038fc9d7695eafbbc66fd32b6.svg]]
|
||||
[[file:./.ob-jupyter/8a4fb84fa9e3403cc504bf346399d716a3632874.svg]]
|
||||
[[file:./.ob-jupyter/66a6c0a8155fb358ddaff688faf0b9688d811970.svg]]
|
||||
[[file:./.ob-jupyter/aac1cd42fcea2716c112f423674620996e971b51.svg]]
|
||||
[[file:./.ob-jupyter/b2474a687485dd0c5ef432bab65577445bfb3af8.svg]]
|
||||
[[file:./.ob-jupyter/c05e38691ec6390fcb6a1d348ad676f7f1593f95.svg]]
|
||||
[[file:./.ob-jupyter/bdf956f38937df3eea83c24b78b56a39c53c94c9.svg]]
|
||||
[[file:./.ob-jupyter/b869d7a4f7c8ef6ea1ec832172c6e9f0874e52e4.svg]]
|
||||
[[file:./.ob-jupyter/69d46626832953e6cef4eaa7588057bb340a35e5.svg]]
|
||||
[[file:./.ob-jupyter/e23c99ac76f0c7171ffc8928c0826506a06c4105.svg]]
|
||||
[[file:./.ob-jupyter/f771cb1d92e5dedbba4ff856543ca0e59b5b3fee.svg]]
|
||||
[[file:./.ob-jupyter/e06ab97aff6d6f97a0025e3c9fd47ccf4ba1e06c.svg]]
|
||||
[[file:./.ob-jupyter/4b60282e07356bc7faa706d37adf0469093142fe.svg]]
|
||||
[[file:./.ob-jupyter/eb6bb6240be7c02c5d3f7f6cb2e16fbf26715d62.svg]]
|
||||
[[file:./.ob-jupyter/6b03ad3f30e07aeeb96fa1337d6343a413ddadda.svg]]
|
||||
[[file:./.ob-jupyter/50b37a6e55de4c46d338671cb9701a4368de9743.svg]]
|
||||
[[file:./.ob-jupyter/8fa686381fd81aa7a62f133814ebc30d55d74c65.svg]]
|
||||
[[file:./.ob-jupyter/0ce1c995679c905cf03f5f22b77d170c6bb36256.svg]]
|
||||
[[file:./.ob-jupyter/fc83287a59e890e937b19644ee4280935950fc9a.svg]]
|
||||
[[file:./.ob-jupyter/b344bce75b6a4a7600eea5af656816936e75fef1.svg]]
|
||||
[[file:./.ob-jupyter/7e601568d54a636a176925f29f8bd289530c643b.svg]]
|
||||
:END:
|
||||
|
||||
* Things to Look At
|
||||
|
|
|
|||
Loading…
Add table
Reference in a new issue